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DTSTART:19810329T030000
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UID:DSC-23005
DTSTART;TZID=Europe/Berlin:20260710T090000
SEQUENCE:1782279397
TRANSP:OPAQUE
DTEND;TZID=Europe/Berlin:20260710T150000
URL:https://www.dresden-science-calendar.de/calendar/de/detail/23005
LOCATION:HZDR\, Bautzner Landstraße 40001328 Dresden
SUMMARY:Gupta: Genomics and proteomics workshop
CLASS:PUBLIC
DESCRIPTION:Speaker: Ishaan Gupta\nInstitute of Speaker: \nTopics:\n\n Loca
 tion:\n  Name: HZDR (620/018 - Kleiner Hörsaal Kernphysik)\n  Street: Bau
 tzner Landstraße 400\n  City: 01328 Dresden\n  Phone: \n  Fax: \nDescript
 ion: Genomics and proteomics workshop  Morning: Sequencing Foundations &am
 p\;amp\; Quality Control Introduction to high-throughput sequencing techno
 logies (Short-read vs. Long-read platforms like Oxford Nanopore). Experime
 ntal design considerations for different samples Hands-on/Conceptual walkt
 hrough: Raw data processing (FASTQ)\, quality filtering\, and adapter trim
 ming. Afternoon: Taxonomic Profiling &amp\;amp\; Diversity Metrics Taxonom
 ic Classification: Using computational pipelines to identify bacteria\, vi
 ruses\, or fungi present in a sample. Diversity Analysis: Exploring Alpha 
 and Beta diversity to compare microbial composition across different treat
 ment groups or environments. Functional Metagenomics: Introduction to pred
 icting the metabolic and functional potential of the community (e.g.\, map
 ping antimicrobial resistance genes).  Day 2: Transcriptomics &amp\;amp\; 
 Spatial Integration Focus: Investigating gene expression dynamics—discov
 ering \"what genes are actively doing\" and \"where it is happening.\" Mor
 ning: Bulk and Single-Cell RNA-Seq Analysis Fundamentals of Transcriptomic
 s: Measuring global gene expression. The RNA-Seq Pipeline: Mapping reads t
 o a reference genome and quantifying expression levels. Differential Gene 
 Expression (DGE): Identifying statistically significant changes in gene ex
 pression between control and experimental conditions. Introduction to Cell
 ular Heterogeneity: High-level concepts of Single-Cell RNA-Seq (scRNA-Seq)
 . Afternoon: Spatial Frontiers &amp\;amp\; Biological Insights Spatial Tra
 nscriptomics: Understanding how gene expression is organized geographicall
 y within a tissue section. Pathway Analysis: Translating gene lists into b
 iological meaning by mapping them to metabolic pathways (e.g.\, KEGG\, Gen
 e Ontology).
DTSTAMP:20260624T143651Z
CREATED:20260623T053920Z
LAST-MODIFIED:20260624T053637Z
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